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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38644603_38648701_F

Intron Information:

Intron Rank:

128652

Intron Class:

major

Intron Phase:

Intron Coordinates:

38644603 - 38648701

Intron Length:

4099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GCTTCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTGTGCTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.9

34.9

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

80.9

0.69

0.9

77.3

35.9

Minor 5ss

36.3

-1.5

2.9

41.7

Minor BPS

56.4

0.28

2.2

79.19

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042987

38639682 - 38649932

10251

ENSAPLT00000033633

38641889 - 38649932

8044

ENSAPLT00000020630

38641889 - 38649932

8044