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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38756496_38758472_F

Intron Information:

Intron Rank:

146138

Intron Class:

major

Intron Phase:

Intron Coordinates:

38756496 - 38758472

Intron Length:

1977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

TCTTTTGGAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.1

32.7

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

100

1.12

0.4

100

Minor 5ss

36.9

-1.5

3.4

43.6

Minor BPS

43.8

-0.4

2.2

58.67

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018261

38755803 - 38758869

3067