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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38918811_39100650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38918811 - 39100650

Intron Length:

181840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTATTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGTGATGTAAAT

Flanking Amino Acid:

LSPNRRRRLGGFQIQRGKTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.5

0.73

0.8

81.4

36.1

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

44.7

-0.3

2.2

66.63

43.9

Associated Gene:

Gene:

SLC25A21

Ensembl Gene ID:

ENSAPLG00000013311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017362

38842670 - 39100823

258154