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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38961406_39100650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38961406 - 39100650

Intron Length:

139245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TATTATTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTA

Flanking Amino Acid:

SHQIAAGGSAGLVEICLMHP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.2

0.72

0.8

36.6

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

59.9

0.31

1.8

75.92

35.5

Associated Gene:

Gene:

SLC25A21

Ensembl Gene ID:

ENSAPLG00000013311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017396

38842670 - 39100717

258048

ENSAPLT00000013881

38851911 - 39100717

248807