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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39155923_39168424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39155923 - 39168424

Intron Length:

12502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTAG

5'SS Class:

strong_major

3'SS Sequence:

GTTACATTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAT

U12 Branch Point Sequence:

TTGTTGGTAAAA

Flanking Amino Acid:

TEAKIAEKIAALVEEVYSAQ

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.3

39.1

Major BPS

0.37

1.3

Major PPT

77.3

0.61

0.9

40.3

Minor 5ss

42.2

-0.9

3.1

54.5

49.7

Minor BPS

44.4

-0.4

2.6

63.53

43.1

Associated Gene:

Gene:

MIPOL1

Ensembl Gene ID:

ENSAPLG00000011170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011627

39129699 - 39287318

157620