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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39173741_39173999_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39173741 - 39173999

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTGTTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TAACATATAATG

Flanking Amino Acid:

ENINPEENDMTLQELLNRIN

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.6

41.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

62.1

0.27

1.1

58.2

42.5

Minor 5ss

39.7

-1.2

3.2

53.4

44.8

Minor BPS

45.3

-0.4

1.7

49.21

Associated Gene:

Gene:

MIPOL1

Ensembl Gene ID:

ENSAPLG00000011170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011627

39129699 - 39287318

157620