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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39195734_39240831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39195734 - 39240831

Intron Length:

45098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

TATCATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

ATTTGTTTATCA

Flanking Amino Acid:

AENNQERALKAELIALQQEK

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

83.9

0.76

0.8

35.9

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

57.4

0.23

73.26

Associated Gene:

Gene:

MIPOL1

Ensembl Gene ID:

ENSAPLG00000011170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011627

39129699 - 39287318

157620