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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39330693_39335960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39330693 - 39335960

Intron Length:

5268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTGAA

5'SS Class:

major

3'SS Sequence:

TTCTCTTATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTTCTCTTATAC

Flanking Amino Acid:

LGQKYNLKMEQVLVEHKEIK

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

71.3

34.5

Major BPS

71.4

0.53

67.3

39.3

Major PPT

84.4

0.77

0.8

80.1

30.9

Minor 5ss

32.3

-2

3.4

39.2

Minor BPS

59.7

0.28

1.7

72.9

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725