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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39336045_39336850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39336045 - 39336850

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACATTC

5'SS Class:

major

3'SS Sequence:

TTTCGCTCAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

CACCTCTTAAAT

Flanking Amino Acid:

VLPSFHQASLTPVVQKEPQA

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.2

68.6

37.4

Major BPS

77.8

0.69

78.2

31.8

Major PPT

63.5

0.3

1.1

64.8

35.6

Minor 5ss

48.2

-0.2

2.9

65.1

40.6

Minor BPS

58.4

0.34

1.5

67.41

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420