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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39340344_39343786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39340344 - 39343786

Intron Length:

3443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATTTTT

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

AGATTCTTGATT

Flanking Amino Acid:

SFLSTHASNVKGQHYPSIHH

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

83.5

28.7

Major BPS

83.8

0.84

73.6

41.8

Major PPT

88.1

0.86

0.6

81.5

30.4

Minor 5ss

47.9

-0.2

2.8

67.6

37.2

Minor BPS

66.5

0.6

1.2

74.21

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725