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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39343997_39350557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39343997 - 39350557

Intron Length:

6561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATTTATTCATCC

Flanking Amino Acid:

IYLKEQAERKRLCYEGVPVS

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.59

69.6

41.6

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

48.9

-0.1

1.9

66.1

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725