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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39350715_39351154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39350715 - 39351154

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATGTTAGCT

Flanking Amino Acid:

KTQLQLVGEKVSIYPEALKM

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.9

0.56

1.1

75.7

37.8

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

52.3

0.15

2.3

80.22

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725