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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39352342_39354184_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39352342 - 39354184

Intron Length:

1843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTCTTTTATCT

Flanking Amino Acid:

DDHDFYDYVQAKTLRRCQSL

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.8

88.7

25.2

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

82.5

0.73

0.7

78.2

29.4

Minor 5ss

42.3

-0.8

2.8

59.2

45.4

Minor BPS

0.61

1.5

84.71

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725