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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39355724_39356912_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

39355724 - 39356912

Intron Length:

1189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTCTTT

5'SS Class:

weak_major

3'SS Sequence:

TATTTTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

ATTTAGTTAATT

Flanking Amino Acid:

KLIQPPRILKRSVSLGRLPT

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.2

65.4

40.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

0.72

0.7

81.8

29.8

Minor 5ss

58.1

0.27

2.3

74.5

41.6

Minor BPS

60.4

0.4

2.2

83.35

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725