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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39358740_39361797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39358740 - 39361797

Intron Length:

3058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

GGGGTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGCCTTTTATGT

Flanking Amino Acid:

FITKMNKNKADTYLSKAEIY

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.5

1.14

0.6

94.3

17.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

66.5

0.37

1.1

61.5

48.6

Minor 5ss

40.3

-1.1

2.8

43.3

Minor BPS

46.2

-0.2

1.8

60.95

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725