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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39361974_39362378_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39361974 - 39362378

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTTTTCATT

Flanking Amino Acid:

LLLAMDDYAKCFQYNPKRTD

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

100

1.24

0.5

100

Major PPT

86.2

0.81

0.7

81.8

28.6

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

62.8

0.48

1.7

81.14

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725