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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39362516_39365698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39362516 - 39365698

Intron Length:

3183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TCTTTCTTATTA

Flanking Amino Acid:

IREDPGNAQARLYRGRTYAK

Intron Amino Acid Position:

1004

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

81.6

0.78

0.8

24.9

Major PPT

81.1

0.7

0.8

82.2

28.1

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

66.9

0.53

1.5

74.26

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725