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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39367953_39369272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39367953 - 39369272

Intron Length:

1320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATGC

5'SS Class:

major

3'SS Sequence:

TTTTAAATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCTTTTTAAAT

Flanking Amino Acid:

YLCRAQAYHKIHNLSNAVKD

Intron Amino Acid Position:

1152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

68.8

37.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.4

0.71

0.9

74.5

38.9

Minor 5ss

38.4

-1.3

51.4

45.1

Minor BPS

72.7

0.79

1.3

84.29

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725