Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_393703_393790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

393703 - 393790

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CCCTACCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAG

U12 Branch Point Sequence:

CTTCCCCTACCC

Flanking Amino Acid:

KVREIQAAIKVSSHIQVLAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

37.9

Major BPS

46.4

-0.2

1.6

60.7

45.9

Major PPT

72.8

0.51

0.8

65.4

30.1

Minor 5ss

42.7

-0.8

57.9

46.7

Minor BPS

51.9

0.04

68.8

42.6

Associated Gene:

Gene:

TEAD1

Ensembl Gene ID:

ENSAPLG00000016417

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042611

355120 - 508802

153683

ENSAPLT00000040884

355120 - 508802

153683