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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39371527_39373609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39371527 - 39373609

Intron Length:

2083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTATATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTATCTATATTT

Flanking Amino Acid:

KIQMKAEKTKDAVKSFKQAI

Intron Amino Acid Position:

1259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

81.9

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.63

0.9

74.4

39.2

Minor 5ss

31.5

-2.1

2.8

40.7

45.1

Minor BPS

55.7

0.26

1.8

77.58

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725