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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39373745_39375155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39373745 - 39375155

Intron Length:

1411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTATT

5'SS Class:

major

3'SS Sequence:

GTCATTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

CCATATTTAATC

Flanking Amino Acid:

CYMEQTNLLQARDAFNMAIR

Intron Amino Acid Position:

1304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.2

36.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

76.2

0.59

0.9

73.6

36.9

Minor 5ss

36.6

-1.5

3.1

51.4

45.2

Minor BPS

56.5

0.18

1.5

59.44

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725