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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39375306_39375568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39375306 - 39375568

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATAT

5'SS Class:

strong_major

3'SS Sequence:

TTCATCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TATGCCACATCA

Flanking Amino Acid:

TLALCPSHFQAYMSRAAYYG

Intron Amino Acid Position:

1354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.6

29.2

Major BPS

84.8

0.86

85.7

34.9

Major PPT

82.7

0.74

0.8

77.2

31.4

Minor 5ss

39.7

-1.2

3.1

56.3

47.9

Minor BPS

45.5

-0.3

2.1

62.07

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725