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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39376503_39377984_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39376503 - 39377984

Intron Length:

1482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATAT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATTTTCTAAAAT

Flanking Amino Acid:

CYHQIKNFRQALKDYGILIL

Intron Amino Acid Position:

1439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

79.4

29.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

81.9

0.72

0.8

77.5

36.5

Minor 5ss

45.7

-0.5

2.9

64.3

47.2

Minor BPS

0.55

1.7

83.22

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725