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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39380617_39382325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39380617 - 39382325

Intron Length:

1709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTATTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TCACTCGTAGCT

Flanking Amino Acid:

IFQAIGICYHRLNEFEEAVR

Intron Amino Acid Position:

1505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

82.3

0.8

83.6

25.8

Major PPT

76.4

0.59

0.8

73.6

35.9

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

46.2

-0.2

2.2

65.66

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725