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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39382537_39384198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39382537 - 39384198

Intron Length:

1662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAC

5'SS Class:

major

3'SS Sequence:

CAATTCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AGTTTCTTATTG

Flanking Amino Acid:

ARICLGYNLQVHGKLQRAWN

Intron Amino Acid Position:

1576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

40.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

70.4

0.46

0.9

67.3

38.5

Minor 5ss

37.8

-1.4

3.1

50.8

45.8

Minor BPS

58.5

0.13

1.6

61.97

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725