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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39384352_39384548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39384352 - 39384548

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATCTT

5'SS Class:

major

3'SS Sequence:

TATTTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGAAT

U12 Branch Point Sequence:

TTTCCCTGGATA

Flanking Amino Acid:

AFQDINAALKLTTTAPLLTN

Intron Amino Acid Position:

1627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.1

41.1

Major BPS

0.2

1.3

67.7

36.5

Major PPT

88.2

0.86

0.7

85.7

28.5

Minor 5ss

38.1

-1.3

3.5

58.1

46.5

Minor BPS

66.2

0.5

1.4

76.91

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725