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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39386869_39388131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39386869 - 39388131

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

TTGTTTTTACAG

Flanking Amino Acid:

YEQAEKDISTALSIQPNDAL

Intron Amino Acid Position:

1759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

76.9

34.6

Major BPS

62.7

0.32

1.4

63.4

Major PPT

88.6

0.87

0.7

83.2

31.9

Minor 5ss

47.5

-0.2

2.8

64.9

46.3

Minor BPS

51.1

-0.1

1.8

59.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044578

39318849 - 39388268

69420

ENSAPLT00000011689

39329544 - 39388268

58725