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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39408614_39409685_R

Intron Information:

Intron Rank:

129429

Intron Class:

major

Intron Phase:

Intron Coordinates:

39408614 - 39409685

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGAG

5'SS Class:

major

3'SS Sequence:

TTATGTGTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TAGACAATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

40.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

0.45

1.1

62.8

47.1

Minor 5ss

35.3

-1.7

3.4

46.6

48.7

Minor BPS

46.7

-0.1

66.19

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040968

39407804 - 39424117

16314