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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39440195_39448372_F

Intron Information:

Intron Rank:

146839

Intron Class:

major

Intron Phase:

Intron Coordinates:

39440195 - 39448372

Intron Length:

8178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAG

U12 Branch Point Sequence:

AGGAGAAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

47.6

-0.1

1.6

53.4

40.4

Major PPT

100

1.12

0.4

100

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

35.5

-1

2.2

50.17

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019997

39440129 - 39448905

8777