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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39780572_39781161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39780572 - 39781161

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGTAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

YIDTEHGGSQARFLLSKVNP

Intron Amino Acid Position:

715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

66.9

34.4

Major BPS

0.6

1.2

75.9

36.3

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

41.5

-0.9

3.2

54.8

49.4

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

SEC23A

Ensembl Gene ID:

ENSAPLG00000011245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011767

39776296 - 39802547

26252