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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39801674_39801946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

39801674 - 39801946

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

TATTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCTTTATTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

83.1

0.74

0.8

81.5

35.9

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

56.2

0.27

1.8

76.22

Associated Gene:

Gene:

SEC23A

Ensembl Gene ID:

ENSAPLG00000011245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011767

39776296 - 39802547

26252