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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39808854_39809026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39808854 - 39809026

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTACTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTATTTACTT

Flanking Amino Acid:

SQHLDSNVNMPKLEDEEGWK

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.4

0.77

0.8

82.6

33.5

Minor 5ss

29.8

-2.3

2.6

30.5

37.5

Minor BPS

0.52

1.8

84.41

36.8

Associated Gene:

Gene:

GEMIN2

Ensembl Gene ID:

ENSAPLG00000012052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012580

39805370 - 39813081

7712