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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39822636_39824681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39822636 - 39824681

Intron Length:

2046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

MDEKGKQRNRRIFGLLM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

87.1

0.83

0.6

85.7

21.4

Minor 5ss

41.2

-1

2.5

51.4

45.1

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042593

39822481 - 39869364

46884

ENSAPLT00000028355

39822481 - 39869364

46884