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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39825768_39826478_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

39825768 - 39826478

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATACTTT

5'SS Class:

weak_minor

3'SS Sequence:

TTATTTATCTTAG|C

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

AGTTCTTTATTT

Flanking Amino Acid:

MVWKYGVPQKRRQEIEQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.1

65.1

41.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

78.8

0.65

0.8

78.5

34.4

Minor 5ss

0.67

2.4

81.8

38.5

Minor BPS

65.9

0.58

1.5

78.88

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036054

39825634 - 39869364

43731