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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39828034_39837631_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39828034 - 39837631

Intron Length:

9598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGTGG

5'SS Class:

major

3'SS Sequence:

CAACATATTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TTTCTTCCAACA

Flanking Amino Acid:

KQEQNKEQEEAAMSRVQATT

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

61.3

45.8

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

65.9

0.36

43.8

Minor 5ss

35.7

-1.6

3.2

38.2

46.7

Minor BPS

49.8

-0

1.8

69.52

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036054

39825634 - 39869364

43731

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000042593

39822481 - 39869364

46884