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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39840642_39841168_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39840642 - 39841168

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTATG

5'SS Class:

major

3'SS Sequence:

TATGTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AATCCTCTAAAA

Flanking Amino Acid:

QESESNYGHSELFAGIGSKR

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.2

73.9

42.7

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

81.6

0.71

0.9

36.1

Minor 5ss

34.3

-1.8

2.9

42.3

44.5

Minor BPS

49.9

-0

1.7

63.05

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028359

39836380 - 39869364

32985

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884

ENSAPLT00000036054

39825634 - 39869364

43731