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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39841409_39841545_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

39841409 - 39841545

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ATAAACAAACCAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTTCCTTATAA

Flanking Amino Acid:

FQVQSYIPSNEGSWIYQILQ

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

32.7

Major BPS

78.6

0.71

78.6

Major PPT

49.5

-0

1.1

39.1

42.6

Minor 5ss

38.2

-1.3

3.1

45.3

45.2

Minor BPS

73.6

0.74

1.6

84.92

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028359

39836380 - 39869364

32985

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884

ENSAPLT00000036054

39825634 - 39869364

43731