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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39846916_39847019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39846916 - 39847019

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

CTATTTGTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

AATGCTGCAACA

Flanking Amino Acid:

YQSVRSRLYVGREKQLANKI

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

77.3

0.61

0.9

72.4

37.6

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

45.3

-0.3

2.2

58.88

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036054

39825634 - 39869364

43731

ENSAPLT00000028359

39836380 - 39869364

32985

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000043198

39843390 - 39869364

25975

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884