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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39853833_39854556_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39853833 - 39854556

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCAATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTCTGTCAATC

Flanking Amino Acid:

KGETENGEHLDDQQKRTVKK

Intron Amino Acid Position:

898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

79.4

29.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.6

0.49

71.1

38.8

Minor 5ss

45.7

-0.5

2.9

64.3

47.2

Minor BPS

46.8

-0.2

2.1

62.01

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036054

39825634 - 39869364

43731

ENSAPLT00000028359

39836380 - 39869364

32985

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000043198

39843390 - 39869364

25975

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884