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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39854604_39854820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39854604 - 39854820

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGACTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

TVKKLIYAAKLNACLKTMET

Intron Amino Acid Position:

914

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.5

39.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.8

0.53

0.9

67.9

38.2

Minor 5ss

-2.2

3.3

39.7

46.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028359

39836380 - 39869364

32985

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000043198

39843390 - 39869364

25975

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884

ENSAPLT00000036054

39825634 - 39869364

43731