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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39856197_39857698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39856197 - 39857698

Intron Length:

1502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTTTTT

5'SS Class:

major

3'SS Sequence:

AATTTTCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTTCTTAAAG

Flanking Amino Acid:

LYQENEMKLHRKLTVEERER

Intron Amino Acid Position:

990

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

76.9

34.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

72.3

0.5

1.1

37.5

Minor 5ss

39.7

-1.2

3.2

58.4

46.1

Minor BPS

73.4

0.6

1.4

74.89

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000043198

39843390 - 39869364

25975

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884

ENSAPLT00000036054

39825634 - 39869364

43731

ENSAPLT00000028359

39836380 - 39869364

32985