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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39859076_39859436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39859076 - 39859436

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

ATCTTTTTCACA

Flanking Amino Acid:

ERTIRSYQNQITSHEKKAHD

Intron Amino Acid Position:

1045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

76.8

0.67

40.9

Major PPT

84.3

0.77

0.8

79.6

31.8

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

57.9

0.24

1.7

68.42

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000043198

39843390 - 39869364

25975

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884

ENSAPLT00000036054

39825634 - 39869364

43731

ENSAPLT00000028359

39836380 - 39869364

32985