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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39863796_39865165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39863796 - 39865165

Intron Length:

1370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGAAA

5'SS Class:

major

3'SS Sequence:

TTTTCAATGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATGATA

Flanking Amino Acid:

RERRIILPPPGEPYSDAVLP

Intron Amino Acid Position:

1204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

69.9

35.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

70.4

0.46

38.3

Minor 5ss

-1.5

3.2

47.6

48.1

Minor BPS

57.8

0.24

1.9

76.78

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036054

39825634 - 39869364

43731

ENSAPLT00000028359

39836380 - 39869364

32985

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000043198

39843390 - 39869364

25975

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884