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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39867783_39868186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39867783 - 39868186

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TGTTGTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

TTTCCCAAAGCT

Flanking Amino Acid:

NGMKDHSNLSDSLPDQPLAS

Intron Amino Acid Position:

1274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

69.1

41.9

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

76.1

0.59

68.9

Minor 5ss

38.1

-1.3

2.8

46.7

41.7

Minor BPS

49.3

0.03

2.2

78.77

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028355

39822481 - 39869364

46884

ENSAPLT00000043198

39843390 - 39869364

25975

ENSAPLT00000013258

39836380 - 39869364

32985

ENSAPLT00000042593

39822481 - 39869364

46884

ENSAPLT00000036054

39825634 - 39869364

43731

ENSAPLT00000028359

39836380 - 39869364

32985