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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39916070_39916569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39916070 - 39916569

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTATC

5'SS Class:

major

3'SS Sequence:

TTTTCCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTGTATTAGACA

Flanking Amino Acid:

ETLKEKLKQNWQNMRERTKE

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.3

77.9

36.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

88.3

0.86

0.7

86.1

26.6

Minor 5ss

35.9

-1.6

2.7

43.6

37.6

Minor BPS

47.3

-0.2

1.9

58.34

41.9

Associated Gene:

Gene:

FAM161B

Ensembl Gene ID:

ENSAPLG00000013697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014265

39913073 - 39918923

5851