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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39917158_39917550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39917158 - 39917550

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGA

5'SS Class:

strong_major

3'SS Sequence:

CCATTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAA

U12 Branch Point Sequence:

ACACACTGAATA

Flanking Amino Acid:

RQRQANERIKDSHQLSKVSM

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.8

Major BPS

53.1

0.08

1.2

56.3

37.2

Major PPT

82.9

0.74

0.8

80.5

31.3

Minor 5ss

31.9

-2.1

38.8

46.3

Minor BPS

48.1

-0.1

1.6

54.46

37.5

Associated Gene:

Gene:

FAM161B

Ensembl Gene ID:

ENSAPLG00000013697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014265

39913073 - 39918923

5851