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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39922700_39923055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39922700 - 39923055

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACTAAA

5'SS Class:

major

3'SS Sequence:

CTCTGTTTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTGTTTTGCATC

Flanking Amino Acid:

DGRRLQTKLLIGADGHNSVV

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

75.9

35.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

80.4

0.68

0.8

75.5

32.9

Minor 5ss

40.7

-1

2.6

47.7

43.2

Minor BPS

47.7

-0.1

1.8

61.86

38.6

Associated Gene:

Gene:

COQ6

Ensembl Gene ID:

ENSAPLG00000013830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014441

39919664 - 39927217

7554