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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39923328_39923538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39923328 - 39923538

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTAAACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTCTCTTAAACC

Flanking Amino Acid:

LPTGPIALLPLSDTASSLVW

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

67.2

39.4

Major BPS

77.8

0.69

78.2

31.8

Major PPT

69.8

0.45

63.9

40.7

Minor 5ss

38.8

-1.3

3.1

51.6

45.1

Minor BPS

69.4

0.59

1.6

77.59

Associated Gene:

Gene:

COQ6

Ensembl Gene ID:

ENSAPLG00000013830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014441

39919664 - 39927217

7554