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Intron Name: Anas_platyrhynchos_platyrhynchos_5_39930869_39931877_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
39930869 - 39931877

Intron Length:
1009

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATTGAC

5'SS Class:
strong_major

3'SS Sequence:
TTTCCTTCTTTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTTTTATTT

Flanking Amino Acid:
VRDFERKAKEVCDNMERYNS

Intron Amino Acid Position:
400

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.5
0.84
0.9
77.7
30.4

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
86.1
0.81
0.6
85.4
21.9

Minor 5ss
33
-1.9
3.2
43.5
44.2

Minor BPS
70.5
0.72
1.5
86.8
33.5

Associated Gene:

Gene:
ENTPD5

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

39930418 - 39948545
18128

39930482 - 39945572
15091