Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_39931935_39932264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39931935 - 39932264

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAATTGA

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GTTTTCTCACCT

Flanking Amino Acid:

YDRAVDTNLIDYEQGGVLEV

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

70.1

36.7

Major BPS

0.87

0.8

85.6

Major PPT

0.97

0.6

91.8

19.1

Minor 5ss

39.1

-1.2

2.9

46.7

43.9

Minor BPS

60.1

0.4

1.8

80.64

41.1

Associated Gene:

Gene:

ENTPD5

Ensembl Gene ID:

ENSAPLG00000014079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038838

39930418 - 39948545

18128

ENSAPLT00000014717

39930482 - 39945572

15091